STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS67865.1Fucose 4-O-acetylase. (407 aa)    
Predicted Functional Partners:
SDS80496.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.864
SDS71405.1
O-antigen ligase.
 
    0.686
SDS01283.1
CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase.
 
     0.683
SDS67804.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.566
SDS67766.1
Voltage-gated potassium channel.
       0.560
SDS67908.1
O-acetylhomoserine sulfhydrylase.
       0.529
SDT35728.1
Hypothetical protein.
  
     0.512
SDS71361.1
O-antigen ligase.
 
    0.497
SDT26812.1
Hypothetical protein.
  
     0.486
SDT22069.1
Beta-lactamase class A.
  
     0.458
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.