STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS70072.1Protein of unknown function. (226 aa)    
Predicted Functional Partners:
SDS70273.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
    0.962
SDS70035.1
Hypothetical protein.
 
     0.961
SDS70184.1
Protein of unknown function.
 
     0.961
SDS70228.1
MoxR-like ATPase.
 
     0.843
SDS70333.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
    0.781
SDS70390.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.781
SDS69858.1
Sporulation and spore germination.
 
     0.729
SDS69926.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
       0.537
SDS69988.1
Two-component system, OmpR family, response regulator MtrA.
       0.529
SDS52800.1
SseB protein N-terminal domain-containing protein.
  
     0.496
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.