STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS70606.1Protein of unknown function. (71 aa)    
Predicted Functional Partners:
SDS70565.1
Phosphomannomutase.
 
     0.850
whiB-2
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
 
    0.751
SDS39470.1
Protein of unknown function.
  
     0.749
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.724
SDS34463.1
Protein of unknown function.
  
     0.687
SDR73233.1
Hypothetical protein.
   
    0.684
SDS70642.1
Hypothetical protein.
       0.618
SDS46350.1
MerR HTH family regulatory protein.
  
     0.616
SDS56311.1
Lsr2 protein.
  
     0.608
SDS34186.1
Superfamily II DNA or RNA helicase.
  
     0.558
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
Server load: low (22%) [HD]