Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR73233.1 | SDS70606.1 | SAMN04489721_0120 | SAMN04489721_1764 | Hypothetical protein. | Protein of unknown function. | 0.684 |
SDS34186.1 | SDS34463.1 | SAMN04489721_1153 | SAMN04489721_1158 | Superfamily II DNA or RNA helicase. | Protein of unknown function. | 0.768 |
SDS34186.1 | SDS39470.1 | SAMN04489721_1153 | SAMN04489721_1248 | Superfamily II DNA or RNA helicase. | Protein of unknown function. | 0.642 |
SDS34186.1 | SDS70606.1 | SAMN04489721_1153 | SAMN04489721_1764 | Superfamily II DNA or RNA helicase. | Protein of unknown function. | 0.558 |
SDS34463.1 | SDS34186.1 | SAMN04489721_1158 | SAMN04489721_1153 | Protein of unknown function. | Superfamily II DNA or RNA helicase. | 0.768 |
SDS34463.1 | SDS39470.1 | SAMN04489721_1158 | SAMN04489721_1248 | Protein of unknown function. | Protein of unknown function. | 0.746 |
SDS34463.1 | SDS46350.1 | SAMN04489721_1158 | SAMN04489721_1360 | Protein of unknown function. | MerR HTH family regulatory protein. | 0.481 |
SDS34463.1 | SDS70606.1 | SAMN04489721_1158 | SAMN04489721_1764 | Protein of unknown function. | Protein of unknown function. | 0.687 |
SDS39470.1 | SDS34186.1 | SAMN04489721_1248 | SAMN04489721_1153 | Protein of unknown function. | Superfamily II DNA or RNA helicase. | 0.642 |
SDS39470.1 | SDS34463.1 | SAMN04489721_1248 | SAMN04489721_1158 | Protein of unknown function. | Protein of unknown function. | 0.746 |
SDS39470.1 | SDS46350.1 | SAMN04489721_1248 | SAMN04489721_1360 | Protein of unknown function. | MerR HTH family regulatory protein. | 0.609 |
SDS39470.1 | SDS56311.1 | SAMN04489721_1248 | SAMN04489721_1527 | Protein of unknown function. | Lsr2 protein. | 0.635 |
SDS39470.1 | SDS70606.1 | SAMN04489721_1248 | SAMN04489721_1764 | Protein of unknown function. | Protein of unknown function. | 0.749 |
SDS46350.1 | SDS34463.1 | SAMN04489721_1360 | SAMN04489721_1158 | MerR HTH family regulatory protein. | Protein of unknown function. | 0.481 |
SDS46350.1 | SDS39470.1 | SAMN04489721_1360 | SAMN04489721_1248 | MerR HTH family regulatory protein. | Protein of unknown function. | 0.609 |
SDS46350.1 | SDS70606.1 | SAMN04489721_1360 | SAMN04489721_1764 | MerR HTH family regulatory protein. | Protein of unknown function. | 0.616 |
SDS46350.1 | whiB-2 | SAMN04489721_1360 | SAMN04489721_1768 | MerR HTH family regulatory protein. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.834 |
SDS56311.1 | SDS39470.1 | SAMN04489721_1527 | SAMN04489721_1248 | Lsr2 protein. | Protein of unknown function. | 0.635 |
SDS56311.1 | SDS70606.1 | SAMN04489721_1527 | SAMN04489721_1764 | Lsr2 protein. | Protein of unknown function. | 0.608 |
SDS70565.1 | SDS70606.1 | SAMN04489721_1763 | SAMN04489721_1764 | Phosphomannomutase. | Protein of unknown function. | 0.850 |
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