STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS72344.1Hypothetical protein. (669 aa)    
Predicted Functional Partners:
SDS72290.1
UDP-galactopyranose mutase.
 
   
 0.853
SDS71760.1
galactofuranosylgalactofuranosylrhamnosyl-N- acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase.
 
     0.701
SDS72386.1
Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
       0.682
SDS72266.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.672
SDS72100.1
Hypothetical protein.
 
     0.547
SDS72063.1
Glycosyl transferase family 2.
 
     0.531
SDS72800.1
Glycosyltransferase, GT2 family.
 
     0.456
SDS71987.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain.
 
     0.439
SDS72148.1
Transferase hexapeptide (six repeat-containing protein).
       0.407
SDS72192.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
       0.407
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.