STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS73948.1PTS system IIB component, L-Asc family. (94 aa)    
Predicted Functional Partners:
SDS74073.1
PTS system IIA component, L-Asc family.
 
 
 0.999
SDR76403.1
Transcriptional antiterminator, BglG family.
 
 
 0.898
SDR72949.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
 
 
 0.885
SDR76469.1
Phosphocarrier protein HPr.
    
  0.856
SDS74111.1
Adenosine deaminase.
       0.791
SDS74162.1
Thymidine phosphorylase.
       0.616
SDS74225.1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
       0.611
SDS71405.1
O-antigen ligase.
  
     0.606
SDS74310.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
       0.595
SDS74367.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
       0.586
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.