Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR99979.1 | SDS18246.1 | SAMN04489721_0622 | SAMN04489721_0900 | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | DivIVA domain-containing protein. | 0.769 |
SDR99979.1 | SDS18649.1 | SAMN04489721_0622 | SAMN04489721_0906 | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | Hypothetical protein. | 0.673 |
SDR99979.1 | SDS23048.1 | SAMN04489721_0622 | SAMN04489721_0981 | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | Protein of unknown function. | 0.574 |
SDR99979.1 | SDS79464.1 | SAMN04489721_0622 | SAMN04489721_1921 | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | Protein of unknown function. | 0.642 |
SDR99979.1 | murA | SAMN04489721_0622 | SAMN04489721_0828 | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.422 |
SDS18246.1 | SDR99979.1 | SAMN04489721_0900 | SAMN04489721_0622 | DivIVA domain-containing protein. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.769 |
SDS18246.1 | SDS18649.1 | SAMN04489721_0900 | SAMN04489721_0906 | DivIVA domain-containing protein. | Hypothetical protein. | 0.743 |
SDS18246.1 | SDS23048.1 | SAMN04489721_0900 | SAMN04489721_0981 | DivIVA domain-containing protein. | Protein of unknown function. | 0.640 |
SDS18246.1 | SDS79464.1 | SAMN04489721_0900 | SAMN04489721_1921 | DivIVA domain-containing protein. | Protein of unknown function. | 0.764 |
SDS18246.1 | SDS79506.1 | SAMN04489721_0900 | SAMN04489721_1922 | DivIVA domain-containing protein. | Tight adherence protein B. | 0.471 |
SDS18246.1 | murA | SAMN04489721_0900 | SAMN04489721_0828 | DivIVA domain-containing protein. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.705 |
SDS18649.1 | SDR99979.1 | SAMN04489721_0906 | SAMN04489721_0622 | Hypothetical protein. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.673 |
SDS18649.1 | SDS18246.1 | SAMN04489721_0906 | SAMN04489721_0900 | Hypothetical protein. | DivIVA domain-containing protein. | 0.743 |
SDS18649.1 | SDS23048.1 | SAMN04489721_0906 | SAMN04489721_0981 | Hypothetical protein. | Protein of unknown function. | 0.482 |
SDS18649.1 | SDS28219.1 | SAMN04489721_0906 | SAMN04489721_1057 | Hypothetical protein. | Hypothetical protein. | 0.713 |
SDS18649.1 | SDS79464.1 | SAMN04489721_0906 | SAMN04489721_1921 | Hypothetical protein. | Protein of unknown function. | 0.633 |
SDS23048.1 | SDR99979.1 | SAMN04489721_0981 | SAMN04489721_0622 | Protein of unknown function. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.574 |
SDS23048.1 | SDS18246.1 | SAMN04489721_0981 | SAMN04489721_0900 | Protein of unknown function. | DivIVA domain-containing protein. | 0.640 |
SDS23048.1 | SDS18649.1 | SAMN04489721_0981 | SAMN04489721_0906 | Protein of unknown function. | Hypothetical protein. | 0.482 |
SDS23048.1 | SDS79464.1 | SAMN04489721_0981 | SAMN04489721_1921 | Protein of unknown function. | Protein of unknown function. | 0.535 |
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