STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS79464.1Protein of unknown function. (87 aa)    
Predicted Functional Partners:
SDS79358.1
Helicase/secretion neighborhood TadE-like protein.
 
   
 0.844
SDS79399.1
Hypothetical protein.
     
 0.838
SDS79506.1
Tight adherence protein B.
 
   
 0.837
SDS18246.1
DivIVA domain-containing protein.
  
     0.764
SDS79545.1
Pilus assembly protein CpaF.
     
 0.729
SDR99979.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
  
     0.642
SDS18649.1
Hypothetical protein.
  
     0.633
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
     0.623
SDS28219.1
Hypothetical protein.
  
     0.537
SDS23048.1
Protein of unknown function.
  
     0.535
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
Server load: low (24%) [HD]