STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS82407.1Xylitol oxidase. (419 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
  0.785
SDS36911.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
    
  0.732
SDS28626.1
Glutamate synthase (NADH) large subunit.
    
 0.721
SDS55564.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.666
SDS55619.1
Electron transfer flavoprotein beta subunit.
  
 
 0.666
SDR92735.1
D-serine deaminase, pyridoxal phosphate-dependent.
 
    0.574
SDT28006.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
 0.571
SDS82825.1
Sugar lactone lactonase YvrE.
 
 
  0.547
SDT18945.1
L-lactate dehydrogenase (cytochrome).
  
  0.529
SDT21975.1
Lactate 2-monooxygenase.
  
  0.529
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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