STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS87820.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (307 aa)    
Predicted Functional Partners:
SDS87873.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.984
SDS87909.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.977
SDR83033.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.940
SDS05610.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.910
SDT39120.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.896
SDT00390.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.894
SDT39451.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.868
SDS84352.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.866
SDT17605.1
Cellobiose ABC transporter membrane protein.
  0.860
SDT15074.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
   0.799
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.