Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS78165.1 | SDS81843.1 | SAMN04489721_1900 | SAMN04489721_1960 | Alpha/beta hydrolase fold. | Phosphate acetyltransferase. | 0.481 |
SDS78165.1 | SDS91367.1 | SAMN04489721_1900 | SAMN04489721_2145 | Alpha/beta hydrolase fold. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.476 |
SDS78165.1 | acpP | SAMN04489721_1900 | SAMN04489721_1246 | Alpha/beta hydrolase fold. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.705 |
SDS78165.1 | atpA | SAMN04489721_1900 | SAMN04489721_1674 | Alpha/beta hydrolase fold. | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.403 |
SDS78165.1 | atpD | SAMN04489721_1900 | SAMN04489721_1672 | Alpha/beta hydrolase fold. | F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.403 |
SDS78165.1 | atpG | SAMN04489721_1900 | SAMN04489721_1673 | Alpha/beta hydrolase fold. | ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.403 |
SDS78165.1 | guaA | SAMN04489721_1900 | SAMN04489721_0263 | Alpha/beta hydrolase fold. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.411 |
SDS78165.1 | guaB | SAMN04489721_1900 | SAMN04489721_0253 | Alpha/beta hydrolase fold. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.408 |
SDS81843.1 | SDS78165.1 | SAMN04489721_1960 | SAMN04489721_1900 | Phosphate acetyltransferase. | Alpha/beta hydrolase fold. | 0.481 |
SDS81843.1 | SDS91367.1 | SAMN04489721_1960 | SAMN04489721_2145 | Phosphate acetyltransferase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.481 |
SDS81843.1 | SDT31956.1 | SAMN04489721_1960 | SAMN04489721_3129 | Phosphate acetyltransferase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.481 |
SDS81843.1 | acpP | SAMN04489721_1960 | SAMN04489721_1246 | Phosphate acetyltransferase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.890 |
SDS81843.1 | atpD | SAMN04489721_1960 | SAMN04489721_1672 | Phosphate acetyltransferase. | F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.580 |
SDS81843.1 | atpG | SAMN04489721_1960 | SAMN04489721_1673 | Phosphate acetyltransferase. | ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.481 |
SDS81843.1 | guaA | SAMN04489721_1960 | SAMN04489721_0263 | Phosphate acetyltransferase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.586 |
SDS91367.1 | SDS78165.1 | SAMN04489721_2145 | SAMN04489721_1900 | Pimeloyl-ACP methyl ester carboxylesterase. | Alpha/beta hydrolase fold. | 0.476 |
SDS91367.1 | SDS81843.1 | SAMN04489721_2145 | SAMN04489721_1960 | Pimeloyl-ACP methyl ester carboxylesterase. | Phosphate acetyltransferase. | 0.481 |
SDS91367.1 | SDS91403.1 | SAMN04489721_2145 | SAMN04489721_2146 | Pimeloyl-ACP methyl ester carboxylesterase. | DNA-binding transcriptional regulator YbjK. | 0.855 |
SDS91367.1 | SDT31956.1 | SAMN04489721_2145 | SAMN04489721_3129 | Pimeloyl-ACP methyl ester carboxylesterase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.614 |
SDS91367.1 | acpP | SAMN04489721_2145 | SAMN04489721_1246 | Pimeloyl-ACP methyl ester carboxylesterase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.705 |
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