STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS92213.1Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family. (576 aa)    
Predicted Functional Partners:
SDS92173.1
Transcriptional regulator PadR-like family protein.
 
     0.808
SDS92317.1
GAF domain-containing protein.
   
   0.613
SDS92116.1
HNH endonuclease.
 
     0.469
SDS71632.1
Methyltransferase domain-containing protein.
   
 
 0.440
SDS90566.1
Methyltransferase domain-containing protein.
   
 
 0.440
SDT31430.1
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase.
   
 
 0.440
SDS92370.1
Uncharacterized conserved protein, contains tandem ACT domains.
       0.410
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.