STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS94891.1NADPH:quinone reductase. (342 aa)    
Predicted Functional Partners:
SDR72949.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
     
 0.787
SDS81843.1
Phosphate acetyltransferase.
     
 0.714
SDS94832.1
Winged helix DNA-binding domain-containing protein.
       0.558
SDS94869.1
Hypothetical protein.
       0.558
SDR71148.1
Acyl-coenzyme A oxidase.
   
  0.547
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.544
SDS94949.1
Regulatory protein, tetR family.
       0.544
SDS23267.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.543
SDT36837.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
   
 0.490
SDT06142.1
Methylmalonate-semialdehyde dehydrogenase [acylating].
   
  0.451
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.