Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS28626.1 | SDS36911.1 | SAMN04489721_1062 | SAMN04489721_1201 | Glutamate synthase (NADH) large subunit. | Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor. | 0.863 |
SDS28626.1 | SDS98780.1 | SAMN04489721_1062 | SAMN04489721_2288 | Glutamate synthase (NADH) large subunit. | FAD/FMN-containing dehydrogenase. | 0.721 |
SDS28626.1 | SDT28006.1 | SAMN04489721_1062 | SAMN04489721_2980 | Glutamate synthase (NADH) large subunit. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.974 |
SDS36911.1 | SDS28626.1 | SAMN04489721_1201 | SAMN04489721_1062 | Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor. | Glutamate synthase (NADH) large subunit. | 0.863 |
SDS36911.1 | SDS98780.1 | SAMN04489721_1201 | SAMN04489721_2288 | Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor. | FAD/FMN-containing dehydrogenase. | 0.732 |
SDS36911.1 | SDT28006.1 | SAMN04489721_1201 | SAMN04489721_2980 | Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.833 |
SDS55564.1 | SDS55619.1 | SAMN04489721_1516 | SAMN04489721_1517 | Electron transfer flavoprotein alpha subunit apoprotein. | Electron transfer flavoprotein beta subunit. | 0.999 |
SDS55564.1 | SDS98780.1 | SAMN04489721_1516 | SAMN04489721_2288 | Electron transfer flavoprotein alpha subunit apoprotein. | FAD/FMN-containing dehydrogenase. | 0.666 |
SDS55619.1 | SDS55564.1 | SAMN04489721_1517 | SAMN04489721_1516 | Electron transfer flavoprotein beta subunit. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.999 |
SDS55619.1 | SDS98780.1 | SAMN04489721_1517 | SAMN04489721_2288 | Electron transfer flavoprotein beta subunit. | FAD/FMN-containing dehydrogenase. | 0.666 |
SDS98650.1 | SDS98723.1 | SAMN04489721_2286 | SAMN04489721_2287 | iron(III) transport system substrate-binding protein. | Cyclopropane-fatty-acyl-phospholipid synthase. | 0.523 |
SDS98650.1 | SDS98780.1 | SAMN04489721_2286 | SAMN04489721_2288 | iron(III) transport system substrate-binding protein. | FAD/FMN-containing dehydrogenase. | 0.523 |
SDS98650.1 | SDS98870.1 | SAMN04489721_2286 | SAMN04489721_2289 | iron(III) transport system substrate-binding protein. | Hypothetical protein. | 0.433 |
SDS98723.1 | SDS98650.1 | SAMN04489721_2287 | SAMN04489721_2286 | Cyclopropane-fatty-acyl-phospholipid synthase. | iron(III) transport system substrate-binding protein. | 0.523 |
SDS98723.1 | SDS98780.1 | SAMN04489721_2287 | SAMN04489721_2288 | Cyclopropane-fatty-acyl-phospholipid synthase. | FAD/FMN-containing dehydrogenase. | 0.955 |
SDS98723.1 | SDS98870.1 | SAMN04489721_2287 | SAMN04489721_2289 | Cyclopropane-fatty-acyl-phospholipid synthase. | Hypothetical protein. | 0.625 |
SDS98780.1 | SDS28626.1 | SAMN04489721_2288 | SAMN04489721_1062 | FAD/FMN-containing dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.721 |
SDS98780.1 | SDS36911.1 | SAMN04489721_2288 | SAMN04489721_1201 | FAD/FMN-containing dehydrogenase. | Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor. | 0.732 |
SDS98780.1 | SDS55564.1 | SAMN04489721_2288 | SAMN04489721_1516 | FAD/FMN-containing dehydrogenase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.666 |
SDS98780.1 | SDS55619.1 | SAMN04489721_2288 | SAMN04489721_1517 | FAD/FMN-containing dehydrogenase. | Electron transfer flavoprotein beta subunit. | 0.666 |
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