STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS98780.1FAD/FMN-containing dehydrogenase. (459 aa)    
Predicted Functional Partners:
SDS98723.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
    0.955
SDS36911.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
    
  0.732
SDS28626.1
Glutamate synthase (NADH) large subunit.
    
 0.721
SDS55564.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.666
SDS55619.1
Electron transfer flavoprotein beta subunit.
  
 
 0.666
SDS98870.1
Hypothetical protein.
       0.625
SDT21975.1
Lactate 2-monooxygenase.
 
  0.597
SDT28006.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
 0.571
SDT18945.1
L-lactate dehydrogenase (cytochrome).
  
  0.529
SDS98650.1
iron(III) transport system substrate-binding protein.
       0.523
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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