STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS99793.1Two-component system, OmpR family, response regulator VanR. (231 aa)    
Predicted Functional Partners:
SDS99756.1
Two-component system, OmpR family, sensor histidine kinase VanS.
 0.992
SDT30803.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 0.947
SDS69926.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 0.932
SDT37146.1
GAF domain-containing protein.
 0.912
SDR82482.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
  0.890
SDS92317.1
GAF domain-containing protein.
 
 0.887
SDS99837.1
D-alanyl-D-alanine carboxypeptidase.
 
     0.874
SDR83998.1
Two-component system, OmpR family, sensor kinase.
 
 0.872
SDT28506.1
Two-component system, OmpR family, sensor histidine kinase KdpD.
 0.865
SDT03572.1
Two-component system, OmpR family, sensor kinase.
 0.864
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.