STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT02056.1Uncharacterized HhH-GPD family protein. (192 aa)    
Predicted Functional Partners:
SDS75004.1
Exodeoxyribonuclease-3.
  
 0.911
SDT32302.1
Exodeoxyribonuclease-3.
  
 0.911
SDS87484.1
Putative hydrolase.
 
   
 0.694
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.683
SDS61293.1
A/G-specific DNA-adenine glycosylase.
  
 
 0.571
SDR85349.1
ATP-dependent DNA ligase.
 
   
 0.566
SDT38217.1
5'-3' exonuclease.
 
 
 0.566
ung
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
   
 0.564
SDS59173.1
DNA-3-methyladenine glycosylase II.
    
 
 0.542
SDT15645.1
ATP-dependent DNA ligase LigD ligase module.
 
   
 0.515
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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