STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT06884.1Regulatory protein, luxR family. (542 aa)    
Predicted Functional Partners:
SDT09137.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Non-canonical start codon; manually curated.
 
 0.761
SDS96478.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  0.757
SDT07976.1
Signal transduction histidine kinase.
  
  0.743
SDS63489.1
Signal transduction histidine kinase.
  
  0.727
SDT16425.1
Signal transduction histidine kinase.
  
  0.722
SDT06918.1
Uncharacterized conserved protein YdhG, YjbR/CyaY-like superfamily, DUF1801 family.
       0.705
SDR80233.1
Signal transduction histidine kinase.
  
  0.699
SDS92317.1
GAF domain-containing protein.
  
 0.676
SDT30803.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 0.655
SDR79188.1
Signal transduction histidine kinase.
 
  0.649
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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