Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR72490.1 | SDT07438.1 | SAMN04489721_0095 | SAMN04489721_2460 | Major Facilitator Superfamily protein. | Alpha-glucuronidase. | 0.407 |
SDR73750.1 | SDT07438.1 | SAMN04489721_0135 | SAMN04489721_2460 | NitT/TauT family transport system substrate-binding protein. | Alpha-glucuronidase. | 0.481 |
SDS09160.1 | SDT07438.1 | SAMN04489721_0759 | SAMN04489721_2460 | Cupin domain-containing protein. | Alpha-glucuronidase. | 0.519 |
SDS88803.1 | SDT07438.1 | SAMN04489721_2093 | SAMN04489721_2460 | Hypothetical protein. | Alpha-glucuronidase. | 0.483 |
SDT04774.1 | SDT07438.1 | SAMN04489721_2406 | SAMN04489721_2460 | Helix-turn-helix domain-containing protein. | Alpha-glucuronidase. | 0.484 |
SDT07438.1 | SDR72490.1 | SAMN04489721_2460 | SAMN04489721_0095 | Alpha-glucuronidase. | Major Facilitator Superfamily protein. | 0.407 |
SDT07438.1 | SDR73750.1 | SAMN04489721_2460 | SAMN04489721_0135 | Alpha-glucuronidase. | NitT/TauT family transport system substrate-binding protein. | 0.481 |
SDT07438.1 | SDS09160.1 | SAMN04489721_2460 | SAMN04489721_0759 | Alpha-glucuronidase. | Cupin domain-containing protein. | 0.519 |
SDT07438.1 | SDS88803.1 | SAMN04489721_2460 | SAMN04489721_2093 | Alpha-glucuronidase. | Hypothetical protein. | 0.483 |
SDT07438.1 | SDT04774.1 | SAMN04489721_2460 | SAMN04489721_2406 | Alpha-glucuronidase. | Helix-turn-helix domain-containing protein. | 0.484 |
SDT07438.1 | SDT07522.1 | SAMN04489721_2460 | SAMN04489721_2461 | Alpha-glucuronidase. | Hypothetical protein. | 0.511 |
SDT07438.1 | secE | SAMN04489721_2460 | SAMN04489721_2458 | Alpha-glucuronidase. | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.457 |
SDT07522.1 | SDT07438.1 | SAMN04489721_2461 | SAMN04489721_2460 | Hypothetical protein. | Alpha-glucuronidase. | 0.511 |
secE | SDT07438.1 | SAMN04489721_2458 | SAMN04489721_2460 | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | Alpha-glucuronidase. | 0.457 |