STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT09314.1Rhamnose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (346 aa)    
Predicted Functional Partners:
rbsA
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.991
SDT09224.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 0.985
SDT01824.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 0.983
SDT40516.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 0.937
SDT04205.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  0.934
SDT01778.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  0.921
SDT40494.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  0.917
SDT02308.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  0.906
SDT09263.1
Rhamnose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.890
SDT04146.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 0.822
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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