STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT10973.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (540 aa)    
Predicted Functional Partners:
SDT10936.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.999
SDT11013.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 0.999
SDR83033.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  0.975
SDR79477.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.945
SDT39473.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.908
SDT10905.1
Alpha-glucosidase.
 
    0.899
SDT17656.1
Cellobiose ABC transporter membrane protein.
  
  0.834
SDT17571.1
Cellobiose-binding protein.
 
  0.831
SDT00457.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.780
SDR79374.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.737
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.