STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT11053.1Alpha-glucosidase. (562 aa)    
Predicted Functional Partners:
SDR70090.1
Predicted trehalose synthase.
 
  0.983
SDT10905.1
Alpha-glucosidase.
 
  
 
0.865
SDT41308.1
Predicted trehalose synthase.
 
  0.842
SDS09838.1
Trehalose 6-phosphate synthase/phosphatase.
  
 
 0.820
SDT37423.1
Oligo-1,6-glucosidase.
  
  
 
0.792
SDT11389.1
Alpha-galactosidase.
   
 
 0.783
SDT39561.1
Beta-fructofuranosidase.
  
 
 0.747
SDS14801.1
Trehalose synthase.
 
  
 
0.705
SDT13152.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
 
 
0.692
SDS19007.1
Starch phosphorylase.
  
 0.657
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.