STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT11909.1Pilus assembly protein CpaF. (503 aa)    
Predicted Functional Partners:
SDT11826.1
Tight adherence protein B.
 
  
 0.968
SDT11782.1
Tight adherence protein C.
 
  
 0.966
SDT11941.1
CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein.
  
 0.959
SDT11968.1
Pilus assembly protein CpaB.
 
  
 0.904
SDT12016.1
Putative Flp pilus-assembly TadE/G-like.
 
    0.894
SDT12058.1
TadE-like protein.
  
    0.737
SDS07759.1
Tight adherence protein C.
 
  
 0.713
SDS79506.1
Tight adherence protein B.
  
  
 0.579
SDT11741.1
Lysophospholipase, alpha-beta hydrolase superfamily.
       0.522
SDS07694.1
Tight adherence protein B.
 
  
 0.478
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.