STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT18551.1Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. (678 aa)    
Predicted Functional Partners:
SDT18588.1
Rhamnulokinase.
 
 0.981
SDT18490.1
L-rhamnose isomerase / sugar isomerase.
 
  
  0.951
SDT02440.1
L-ribulose 5-phosphate 4-epimerase.
  
 
 0.828
SDT37021.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.827
SDT18457.1
L-rhamnose mutarotase.
 
  
 0.813
SDS28626.1
Glutamate synthase (NADH) large subunit.
     
 0.812
xylB
Xylulokinase.
 
 
 0.779
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
  0.773
SDR94645.1
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
   
 
 0.770
SDT02230.1
Sugar (pentulose or hexulose) kinase.
  
 
 0.749
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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