Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDT23746.1 | SDT23769.1 | SAMN04489721_2850 | SAMN04489721_2851 | Cystathionine gamma-synthase. | Iron-containing redox enzyme. | 0.531 |
SDT23746.1 | SDT23809.1 | SAMN04489721_2850 | SAMN04489721_2852 | Cystathionine gamma-synthase. | Iron-binding zinc finger CDGSH type. | 0.531 |
SDT23746.1 | SDT23836.1 | SAMN04489721_2850 | SAMN04489721_2853 | Cystathionine gamma-synthase. | Fatty-acid peroxygenase. | 0.463 |
SDT23769.1 | SDT23746.1 | SAMN04489721_2851 | SAMN04489721_2850 | Iron-containing redox enzyme. | Cystathionine gamma-synthase. | 0.531 |
SDT23769.1 | SDT23809.1 | SAMN04489721_2851 | SAMN04489721_2852 | Iron-containing redox enzyme. | Iron-binding zinc finger CDGSH type. | 0.954 |
SDT23769.1 | SDT23836.1 | SAMN04489721_2851 | SAMN04489721_2853 | Iron-containing redox enzyme. | Fatty-acid peroxygenase. | 0.574 |
SDT23769.1 | SDT23874.1 | SAMN04489721_2851 | SAMN04489721_2854 | Iron-containing redox enzyme. | Hypothetical protein. | 0.552 |
SDT23769.1 | SDT23898.1 | SAMN04489721_2851 | SAMN04489721_2855 | Iron-containing redox enzyme. | Hypothetical protein. | 0.408 |
SDT23769.1 | ribA | SAMN04489721_2851 | SAMN04489721_1853 | Iron-containing redox enzyme. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family. | 0.600 |
SDT23809.1 | SDT23746.1 | SAMN04489721_2852 | SAMN04489721_2850 | Iron-binding zinc finger CDGSH type. | Cystathionine gamma-synthase. | 0.531 |
SDT23809.1 | SDT23769.1 | SAMN04489721_2852 | SAMN04489721_2851 | Iron-binding zinc finger CDGSH type. | Iron-containing redox enzyme. | 0.954 |
SDT23809.1 | SDT23836.1 | SAMN04489721_2852 | SAMN04489721_2853 | Iron-binding zinc finger CDGSH type. | Fatty-acid peroxygenase. | 0.574 |
SDT23809.1 | SDT23874.1 | SAMN04489721_2852 | SAMN04489721_2854 | Iron-binding zinc finger CDGSH type. | Hypothetical protein. | 0.552 |
SDT23809.1 | SDT23898.1 | SAMN04489721_2852 | SAMN04489721_2855 | Iron-binding zinc finger CDGSH type. | Hypothetical protein. | 0.408 |
SDT23836.1 | SDT23746.1 | SAMN04489721_2853 | SAMN04489721_2850 | Fatty-acid peroxygenase. | Cystathionine gamma-synthase. | 0.463 |
SDT23836.1 | SDT23769.1 | SAMN04489721_2853 | SAMN04489721_2851 | Fatty-acid peroxygenase. | Iron-containing redox enzyme. | 0.574 |
SDT23836.1 | SDT23809.1 | SAMN04489721_2853 | SAMN04489721_2852 | Fatty-acid peroxygenase. | Iron-binding zinc finger CDGSH type. | 0.574 |
SDT23836.1 | SDT23874.1 | SAMN04489721_2853 | SAMN04489721_2854 | Fatty-acid peroxygenase. | Hypothetical protein. | 0.741 |
SDT23836.1 | SDT23898.1 | SAMN04489721_2853 | SAMN04489721_2855 | Fatty-acid peroxygenase. | Hypothetical protein. | 0.532 |
SDT23874.1 | SDT23769.1 | SAMN04489721_2854 | SAMN04489721_2851 | Hypothetical protein. | Iron-containing redox enzyme. | 0.552 |
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