STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT29909.1Glycosyltransferase involved in cell wall bisynthesis. (421 aa)    
Predicted Functional Partners:
SDT29885.1
Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.773
SDT29548.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.713
SDT29697.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.654
SDT29864.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.637
SDS09838.1
Trehalose 6-phosphate synthase/phosphatase.
  
 0.602
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.589
SDT16037.1
Maltooligosyl trehalose hydrolase.
   
 0.572
SDT29215.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.560
SDS19007.1
Starch phosphorylase.
  
 0.553
SDT29840.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.553
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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