STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT29931.1Alpha/beta hydrolase family protein. (303 aa)    
Predicted Functional Partners:
SDT29956.1
DNA-binding transcriptional regulator, AcrR family; Manually curated.
 
     0.865
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
  0.791
SDS15688.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
   
   0.766
SDS60538.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
  
   0.641
SDT19824.1
L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.601
SDS40255.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
   
   0.538
SDS91680.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
   
   0.538
SDT40194.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
   
   0.538
SDT41064.1
NAD(P)H dehydrogenase (quinone).
   
   0.538
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
   0.432
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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