STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT31480.1Deazaflavin-dependent oxidoreductase, nitroreductase family. (147 aa)    
Predicted Functional Partners:
SDT19498.1
Probable F420-dependent oxidoreductase, MSMEG_2906 family.
  
  
 0.770
SDT36191.1
Adenylyltransferase and sulfurtransferase.
  
 0.770
SDR81191.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
  
 0.753
SDT28006.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.748
SDT32780.1
LPPG:FO 2-phospho-L-lactate transferase.
  
   
 0.738
SDT32356.1
Coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase.
  
   
 0.735
fgd
Coenzyme F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone.
  
  
 0.714
SDS57425.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
  
 0.713
fbiD
2-phospho-L-lactate guanylyltransferase, coenzyme F420 biosynthesis enzyme, CobY/MobA/RfbA family; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
  
   
 0.707
SDT37677.1
Probable F420-dependent oxidoreductase, Rv1855c family.
  
  
 0.702
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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