STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT31935.1Glycolate oxidase. (463 aa)    
Predicted Functional Partners:
SDT34906.1
Catalase; Belongs to the catalase family.
   
 0.783
SDT18945.1
L-lactate dehydrogenase (cytochrome).
 
 0.781
SDT21975.1
Lactate 2-monooxygenase.
 
 0.781
SDT31912.1
Predicted arabinose efflux permease, MFS family.
       0.773
ldh
Malate dehydrogenase (NAD); Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
     
 0.767
SDT22641.1
Phosphoglycolate phosphatase.
    
 0.753
SDS93822.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
   
 
 0.752
SDS28707.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.747
SDT12180.1
Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family.
    
  0.740
SDS10934.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
  0.737
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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