STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT34138.1Hypothetical protein. (139 aa)    
Predicted Functional Partners:
SDT34155.1
DNA-binding response regulator, LytR/AlgR family.
 
     0.948
SDT34181.1
Two-component system, LytT family, sensor kinase.
 
     0.948
SDT34106.1
Na+(or H+)/acetate symporter ActP; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.942
SDS95437.1
Two-component system, LytT family, sensor kinase.
 
     0.781
SDS95485.1
DNA-binding response regulator, LytR/AlgR family.
 
     0.775
SDS95599.1
Na+(or H+)/acetate symporter ActP; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.748
SDT34206.1
Uncharacterized membrane protein, DUF485 family.
 
     0.610
SDT34227.1
Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.495
SDT20636.1
Phospholipase_D-nuclease N-terminal.
  
     0.472
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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