STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT36837.1oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. (691 aa)    
Predicted Functional Partners:
SDT37021.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 
 0.980
SDS23267.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.952
SDS81843.1
Phosphate acetyltransferase.
  
 
 0.899
SDT33200.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.895
SDT37034.1
Enoyl-CoA hydratase/carnithine racemase.
  
 0.895
SDT36992.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 
  
 0.884
SDT37018.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
  
 0.880
SDT36808.1
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.878
SDS68661.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.869
SDT37016.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 
  
 0.853
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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