STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT36938.1acyl-CoA thioesterase. (155 aa)    
Predicted Functional Partners:
SDT36914.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.990
SDT36992.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 
 
 0.981
SDT36961.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
 
 0.979
SDT37016.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 
 
 0.979
SDT37018.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 
 0.979
SDT37021.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 
  0.962
SDT36837.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
 
 
 0.797
SDT32913.1
N-carbamoylputrescine amidase.
  
 
  0.774
SDT36896.1
DNA-binding transcriptional regulator, AcrR family.
       0.677
SDT37034.1
Enoyl-CoA hydratase/carnithine racemase.
  
  0.583
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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