STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT37554.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (225 aa)    
Predicted Functional Partners:
SDT37528.1
Signal transduction histidine kinase.
  0.965
SDT30803.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
 0.953
SDR82482.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
  0.941
SDS69926.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 0.936
SDS99756.1
Two-component system, OmpR family, sensor histidine kinase VanS.
 0.928
SDR83998.1
Two-component system, OmpR family, sensor kinase.
 
 0.905
SDT03572.1
Two-component system, OmpR family, sensor kinase.
 0.903
SDT37146.1
GAF domain-containing protein.
0.899
SDR92102.1
Signal transduction histidine kinase.
  0.866
SDS92317.1
GAF domain-containing protein.
  
 0.865
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.