STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT38433.1Glycosyltransferase involved in cell wall bisynthesis. (563 aa)    
Predicted Functional Partners:
SDS09838.1
Trehalose 6-phosphate synthase/phosphatase.
  
 0.602
SDS80496.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.594
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.589
SDT16037.1
Maltooligosyl trehalose hydrolase.
   
 0.572
SDT29675.1
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase.
  
     0.536
SDT38455.1
3alpha(or 20beta)-hydroxysteroid dehydrogenase.
  
    0.517
SDT29697.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.506
SDT29909.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.498
SDS19007.1
Starch phosphorylase.
   
 0.484
SDS72481.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
  0.482
Your Current Organism:
Agromyces flavus
NCBI taxonomy Id: 589382
Other names: A. flavus, Agromyces flavus Chen et al. 2011, Agromyces sp. CPCC 202695, CCM 7623, CPCC 202695, KCTC 19578
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.