Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW58981.1 | SDW71068.1 | SAMN05421504_101983 | SAMN05421504_1011313 | Helix-turn-helix domain-containing protein. | Glycosyltransferase. | 0.565 |
SDW58981.1 | SDW71111.1 | SAMN05421504_101983 | SAMN05421504_1011314 | Helix-turn-helix domain-containing protein. | Glycosyltransferase. | 0.515 |
SDW58981.1 | SDW71147.1 | SAMN05421504_101983 | SAMN05421504_1011315 | Helix-turn-helix domain-containing protein. | Glycosyltransferase. | 0.522 |
SDW58981.1 | SDY87547.1 | SAMN05421504_101983 | SAMN05421504_107267 | Helix-turn-helix domain-containing protein. | Regulatory protein, luxR family. | 0.408 |
SDW70381.1 | SDW71026.1 | SAMN05421504_1011296 | SAMN05421504_1011312 | Oxidase EvaA. | Glycosyltransferase/glycosyltransferase. | 0.559 |
SDW70381.1 | SDW71068.1 | SAMN05421504_1011296 | SAMN05421504_1011313 | Oxidase EvaA. | Glycosyltransferase. | 0.700 |
SDW70381.1 | SDW71111.1 | SAMN05421504_1011296 | SAMN05421504_1011314 | Oxidase EvaA. | Glycosyltransferase. | 0.666 |
SDW70381.1 | SDW71147.1 | SAMN05421504_1011296 | SAMN05421504_1011315 | Oxidase EvaA. | Glycosyltransferase. | 0.645 |
SDW70381.1 | SDY87547.1 | SAMN05421504_1011296 | SAMN05421504_107267 | Oxidase EvaA. | Regulatory protein, luxR family. | 0.622 |
SDW70381.1 | SDY87820.1 | SAMN05421504_1011296 | SAMN05421504_107277 | Oxidase EvaA. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.575 |
SDW71026.1 | SDW70381.1 | SAMN05421504_1011312 | SAMN05421504_1011296 | Glycosyltransferase/glycosyltransferase. | Oxidase EvaA. | 0.559 |
SDW71026.1 | SDW71068.1 | SAMN05421504_1011312 | SAMN05421504_1011313 | Glycosyltransferase/glycosyltransferase. | Glycosyltransferase. | 0.625 |
SDW71026.1 | SDW71111.1 | SAMN05421504_1011312 | SAMN05421504_1011314 | Glycosyltransferase/glycosyltransferase. | Glycosyltransferase. | 0.604 |
SDW71026.1 | SDW71147.1 | SAMN05421504_1011312 | SAMN05421504_1011315 | Glycosyltransferase/glycosyltransferase. | Glycosyltransferase. | 0.554 |
SDW71026.1 | SDW71194.1 | SAMN05421504_1011312 | SAMN05421504_1011316 | Glycosyltransferase/glycosyltransferase. | Predicted oxidoreductase. | 0.443 |
SDW71026.1 | SDZ36671.1 | SAMN05421504_1011312 | SAMN05421504_113188 | Glycosyltransferase/glycosyltransferase. | Oxidase EvaA. | 0.565 |
SDW71068.1 | SDW58981.1 | SAMN05421504_1011313 | SAMN05421504_101983 | Glycosyltransferase. | Helix-turn-helix domain-containing protein. | 0.565 |
SDW71068.1 | SDW70381.1 | SAMN05421504_1011313 | SAMN05421504_1011296 | Glycosyltransferase. | Oxidase EvaA. | 0.700 |
SDW71068.1 | SDW71026.1 | SAMN05421504_1011313 | SAMN05421504_1011312 | Glycosyltransferase. | Glycosyltransferase/glycosyltransferase. | 0.625 |
SDW71068.1 | SDW71111.1 | SAMN05421504_1011313 | SAMN05421504_1011314 | Glycosyltransferase. | Glycosyltransferase. | 0.729 |
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