STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDX13217.1Bifunctional DNA primase/polymerase, N-terminal. (206 aa)    
Predicted Functional Partners:
SDX36829.1
Hypothetical protein.
  
     0.773
SDY64522.1
Hypothetical protein.
  
     0.772
SDY66838.1
Hypothetical protein.
  
     0.772
SDY69225.1
Hypothetical protein.
  
     0.772
SDZ37835.1
Hypothetical protein.
  
     0.771
SDZ37875.1
Hypothetical protein.
  
     0.770
SDY30920.1
Hypothetical protein.
  
     0.769
SDX35150.1
Hypothetical protein.
  
     0.767
SDX17632.1
Hypothetical protein.
  
     0.767
SDY64551.1
Type VII secretion protein EccE.
  
     0.767
Your Current Organism:
Amycolatopsis xylanica
NCBI taxonomy Id: 589385
Other names: A. xylanica, Amycolatopsis sp. CPCC 202699, Amycolatopsis xylanica Chen et al. 2010, CCM 7627, DSM 45285, KCTC 19581, strain CPCC 202699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.