STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX69650.1Protein of unknown function. (137 aa)    
Predicted Functional Partners:
SDX69578.1
Asparagine synthase (glutamine-hydrolysing).
 
     0.803
SDX69607.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
       0.773
SDX69627.1
Predicted dithiol-disulfide oxidoreductase, DUF899 family.
       0.773
SDX69554.1
dTDP-3-amino-3,6-dideoxy-alpha-D-glucopyranose N,N-dimethyltransferase/dTDP-3-amino-3,4, 6-trideoxy-alpha-D-glucopyranose N,N-dimethyltransferase.
       0.741
SDZ38518.1
Protein of unknown function.
  
     0.633
SDZ01593.1
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist.
  
     0.600
SDY06910.1
Protein of unknown function.
  
     0.523
SDX69532.1
Radical SAM superfamily enzyme YgiQ, UPF0313 family.
       0.470
SDZ42475.1
Hypothetical protein.
  
     0.453
SDX79225.1
3-phenylpropionate/cinnamic acid dioxygenase, small subunit.
  
     0.448
Your Current Organism:
Amycolatopsis xylanica
NCBI taxonomy Id: 589385
Other names: A. xylanica, Amycolatopsis sp. CPCC 202699, Amycolatopsis xylanica Chen et al. 2010, CCM 7627, DSM 45285, KCTC 19581, strain CPCC 202699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.