STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX95563.1FAD/FMN-containing dehydrogenase. (491 aa)    
Predicted Functional Partners:
SDZ29925.1
Luciferase-like monooxygenase.
 
     0.841
SDX95601.1
Aldose 1-epimerase.
     
 0.705
SDY84119.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.701
SDZ09570.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.701
SDW39902.1
NADH-quinone oxidoreductase subunit F.
   
   0.669
SDY60515.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.599
SDW62033.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
 0.554
SDW47963.1
Phosphoenolpyruvate phosphomutase.
    
 0.537
SDX95530.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
    
  0.524
SDW50109.1
Hypothetical protein.
  
 0.513
Your Current Organism:
Amycolatopsis xylanica
NCBI taxonomy Id: 589385
Other names: A. xylanica, Amycolatopsis sp. CPCC 202699, Amycolatopsis xylanica Chen et al. 2010, CCM 7627, DSM 45285, KCTC 19581, strain CPCC 202699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.