STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY32949.1Peptidase family M1. (472 aa)    
Predicted Functional Partners:
SDZ36271.1
Ni,Fe-hydrogenase III large subunit.
    
   0.584
SDX78271.1
Cystathionine beta-synthase.
    
 0.558
SDY73578.1
Aminopeptidase S.
  
 
 0.548
SDY11329.1
Serpin B; Belongs to the serpin family.
   
 0.481
SDY82606.1
PA domain-containing protein.
 
 
 0.464
SDY32926.1
Tat (twin-arginine translocation) pathway signal sequence.
       0.448
SDZ40515.1
Zn-dependent amino-or carboxypeptidase, M28 family.
 
 
 0.444
SDY32888.1
Acetyl esterase.
  
    0.443
SDY32981.1
3-hydroxyacyl-CoA dehydrogenase.
   
   0.436
SDY98376.1
Peptidase family M28.
 
 
 0.434
Your Current Organism:
Amycolatopsis xylanica
NCBI taxonomy Id: 589385
Other names: A. xylanica, Amycolatopsis sp. CPCC 202699, Amycolatopsis xylanica Chen et al. 2010, CCM 7627, DSM 45285, KCTC 19581, strain CPCC 202699
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.