STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY41257.1Acyl dehydratase. (150 aa)    
Predicted Functional Partners:
SDY41222.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
 
   0.825
SDY41297.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 0.818
SDY90253.1
Amino acid adenylation domain-containing protein.
    
 0.802
SDY87973.1
Pimaricinolide synthase PimS1.
  
 0.798
SDY88018.1
Methylaspartate mutase epsilon subunit.
  
 0.798
SDY41186.1
acyl-CoA dehydrogenase.
 
 0.796
SDZ29257.1
Acyl transferase domain-containing protein.
  
 0.786
SDX83075.1
NADPH2:quinone reductase.
 
 
  0.779
SDW62033.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.776
SDW35371.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 0.765
Your Current Organism:
Amycolatopsis xylanica
NCBI taxonomy Id: 589385
Other names: A. xylanica, Amycolatopsis sp. CPCC 202699, Amycolatopsis xylanica Chen et al. 2010, CCM 7627, DSM 45285, KCTC 19581, strain CPCC 202699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.