STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY29108.1Pimeloyl-ACP methyl ester carboxylesterase. (259 aa)    
Predicted Functional Partners:
SDX63590.1
Amino acid adenylation domain-containing protein.
   
 0.751
SDY90253.1
Amino acid adenylation domain-containing protein.
  
 0.709
SDY29048.1
3,4-dihydroxy-9,10-secoandrosta-1,3, 5(10)-triene-9,17-dione 4,5-dioxygenase.
  
 
  0.671
SDY29004.1
3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9, 17-dione monooxygenase.
  
  0.664
SDW23487.1
Thioesterase domain-containing protein.
   
 0.633
SDZ35774.1
Condensation domain-containing protein.
   
 0.633
SDX63787.1
Surfactin synthase thioesterase subunit.
   
 0.630
SDW59113.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
   
 0.623
SDY29080.1
3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9, 17-dione monooxygenase reductase component.
  
    0.576
SDY29023.1
4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10),2-diene-4-oate hydrolase.
       0.570
Your Current Organism:
Amycolatopsis xylanica
NCBI taxonomy Id: 589385
Other names: A. xylanica, Amycolatopsis sp. CPCC 202699, Amycolatopsis xylanica Chen et al. 2010, CCM 7627, DSM 45285, KCTC 19581, strain CPCC 202699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.