STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ30806.1NitT/TauT family transport system permease protein. (285 aa)    
Predicted Functional Partners:
SDZ30773.1
NitT/TauT family transport system ATP-binding protein.
 
 0.978
SDZ30791.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.973
SDX02268.1
NitT/TauT family transport system ATP-binding protein.
 
 0.876
SDZ40109.1
NitT/TauT family transport system ATP-binding protein.
 
 0.876
SDY17282.1
NitT/TauT family transport system ATP-binding protein.
 
 0.868
SDX02192.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.860
SDX05470.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.850
SDZ47389.1
NitT/TauT family transport system ATP-binding protein.
 
 0.842
SDY86082.1
NitT/TauT family transport system ATP-binding protein.
 
 0.841
SDX05432.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.837
Your Current Organism:
Amycolatopsis xylanica
NCBI taxonomy Id: 589385
Other names: A. xylanica, Amycolatopsis sp. CPCC 202699, Amycolatopsis xylanica Chen et al. 2010, CCM 7627, DSM 45285, KCTC 19581, strain CPCC 202699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.