STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ31068.1Dipeptidyl aminopeptidase/acylaminoacyl peptidase. (638 aa)    
Predicted Functional Partners:
SDZ31086.1
Tellurite resistance protein TerC.
       0.686
SDX75872.1
Peptide/nickel transport system substrate-binding protein.
 
     0.628
SDY35682.1
PTS system, N-acetylglucosamine-specific IIA component.
    
 
 0.572
SDZ07928.1
Na+/melibiose symporter.
  
     0.533
SDZ07911.1
Predicted arabinose efflux permease, MFS family.
  
     0.521
SDZ07891.1
Helix-turn-helix domain-containing protein.
  
     0.508
SDX63946.1
Helix-turn-helix domain-containing protein.
  
     0.471
SDZ41312.1
Predicted arabinose efflux permease, MFS family.
  
     0.421
SDZ44824.1
Predicted arabinose efflux permease, MFS family.
  
     0.417
Your Current Organism:
Amycolatopsis xylanica
NCBI taxonomy Id: 589385
Other names: A. xylanica, Amycolatopsis sp. CPCC 202699, Amycolatopsis xylanica Chen et al. 2010, CCM 7627, DSM 45285, KCTC 19581, strain CPCC 202699
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