STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ42201.1Pyruvate dehydrogenase E1 component alpha subunit. (365 aa)    
Predicted Functional Partners:
SDX27586.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.999
SDZ42176.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
 0.999
SDZ42187.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.999
SDX27626.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
 0.996
SDZ12183.1
Dihydrolipoamide dehydrogenase.
 
 
 0.990
SDY80784.1
Dihydrolipoamide dehydrogenase.
 
 
 0.987
SDZ12202.1
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
 
 0.986
SDX73322.1
2-oxoglutarate decarboxylase.
  
 0.985
SDW62033.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 0.981
SDY60515.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.920
Your Current Organism:
Amycolatopsis xylanica
NCBI taxonomy Id: 589385
Other names: A. xylanica, Amycolatopsis sp. CPCC 202699, Amycolatopsis xylanica Chen et al. 2010, CCM 7627, DSM 45285, KCTC 19581, strain CPCC 202699
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.