STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH84720.1KEGG: dps:DP3069 hypothetical protein. (225 aa)    
Predicted Functional Partners:
ADH85841.1
KEGG: dps:DP1838 hypothetical protein.
  
     0.771
ADH85842.1
KEGG: dps:DP1839 hypothetical protein.
  
     0.771
ADH85837.1
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: dps:DP1817 3-oxoacyl-(acyl carrier protein) synthase III.
  
     0.765
ADH85839.1
PFAM: ABC-2 type transporter; KEGG: dps:DP1836 ABC transporter permease.
  
     0.758
ADH85838.1
KEGG: azo:azo0285 acyl carrier protein.
  
     0.731
ADH85815.1
KEGG: dps:DP1844 hypothetical protein.
  
     0.704
ADH85816.1
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.700
ADH86341.1
KEGG: dps:DP0068 hypothetical protein.
  
     0.642
ADH87167.1
NAD-dependent epimerase/dehydratase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
 
     0.629
ADH85643.1
PFAM: protein of unknown function UPF0052 and CofD; KEGG: dps:DP2213 hypothetical protein.
  
     0.593
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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