Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADH84780.1 | ADH84781.1 | DaAHT2_0067 | DaAHT2_0068 | KEGG: abo:ABO_1172 cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | KEGG: dps:DP2866 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. | 0.783 |
ADH84780.1 | ADH84782.1 | DaAHT2_0067 | DaAHT2_0069 | KEGG: abo:ABO_1172 cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | KEGG: tmz:Tmz1t_3492 hypothetical protein. | 0.661 |
ADH84780.1 | ADH85664.1 | DaAHT2_0067 | DaAHT2_0961 | KEGG: abo:ABO_1172 cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Uncharacterized FlgJ-related protein-like protein; KEGG: hha:Hhal_1179 hypothetical protein. | 0.445 |
ADH84780.1 | mdh | DaAHT2_0067 | DaAHT2_0941 | KEGG: abo:ABO_1172 cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.788 |
ADH84780.1 | tadA | DaAHT2_0067 | DaAHT2_0309 | KEGG: abo:ABO_1172 cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.746 |
ADH84780.1 | zupT | DaAHT2_0067 | DaAHT2_0624 | KEGG: abo:ABO_1172 cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Zinc/iron permease; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily. | 0.485 |
ADH84781.1 | ADH84780.1 | DaAHT2_0068 | DaAHT2_0067 | KEGG: dps:DP2866 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. | KEGG: abo:ABO_1172 cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.783 |
ADH84781.1 | ADH84782.1 | DaAHT2_0068 | DaAHT2_0069 | KEGG: dps:DP2866 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. | KEGG: tmz:Tmz1t_3492 hypothetical protein. | 0.661 |
ADH84782.1 | ADH84780.1 | DaAHT2_0069 | DaAHT2_0067 | KEGG: tmz:Tmz1t_3492 hypothetical protein. | KEGG: abo:ABO_1172 cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.661 |
ADH84782.1 | ADH84781.1 | DaAHT2_0069 | DaAHT2_0068 | KEGG: tmz:Tmz1t_3492 hypothetical protein. | KEGG: dps:DP2866 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. | 0.661 |
ADH85664.1 | ADH84780.1 | DaAHT2_0961 | DaAHT2_0067 | Uncharacterized FlgJ-related protein-like protein; KEGG: hha:Hhal_1179 hypothetical protein. | KEGG: abo:ABO_1172 cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.445 |
mdh | ADH84780.1 | DaAHT2_0941 | DaAHT2_0067 | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | KEGG: abo:ABO_1172 cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.788 |
tadA | ADH84780.1 | DaAHT2_0309 | DaAHT2_0067 | CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | KEGG: abo:ABO_1172 cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.746 |
zupT | ADH84780.1 | DaAHT2_0624 | DaAHT2_0067 | Zinc/iron permease; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily. | KEGG: abo:ABO_1172 cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.485 |