STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH84882.1PFAM: TPR repeat-containing protein; KEGG: pjd:Pjdr2_0818 S-layer domain protein. (426 aa)    
Predicted Functional Partners:
ADH85398.1
KEGG: rrs:RoseRS_3383 protein kinase; PFAM: WD40 repeat, subgroup; Serine/threonine-protein kinase-like domain; SMART: WD-40 repeat protein; serine/threonine protein kinase.
  
 0.490
ADH86028.1
KEGG: dae:Dtox_3786 GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; GAF domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; GAF domain protein; response regulator receiver.
  
 
 
 0.477
ADH84881.1
KEGG: kko:Kkor_2437 putative lipoprotein.
       0.436
ADH86840.1
PFAM: Protein of unknown function DUF2064; glycosyl transferase family 2; KEGG: syf:Synpcc7942_1173 hypothetical protein.
  
 
 0.428
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.425
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.419
ADH86853.1
PFAM: ATP-binding region ATPase domain protein; KEGG: sfu:Sfum_3853 hypothetical protein.
   
 0.404
htpG
Heat shock protein Hsp90-like protein; Molecular chaperone. Has ATPase activity.
   
 0.404
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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