STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH85342.1PFAM: protein of unknown function UPF0153; KEGG: sfu:Sfum_1054 hypothetical protein. (253 aa)    
Predicted Functional Partners:
secF
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
    0.815
ADH86164.1
PFAM: methyl-viologen-reducing hydrogenase delta subunit; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dps:DP1107 fusion protein of heterodisulfide reductase, subunit A (HdrA) and hydrogenase, delta subunit (HydD).
 
     0.781
ADH86167.1
KEGG: dps:DP1104 adenylylsulphate reductase, beta subunit (AprB); TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
     0.774
ADH86166.1
KEGG: dps:DP1105 adenylylsulfate reductase subunit alpha; TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: FAD dependent oxidoreductase.
 
     0.772
tatC
Sec-independent periplasmic protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
       0.727
ADH85341.1
KEGG: sat:SYN_00522 phosphoribosylformylglycinamidine synthase.
       0.727
ADH87174.1
PFAM: protein of unknown function DUF81; KEGG: dol:Dole_1353 hypothetical protein.
  
     0.716
ADH85007.1
TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; KEGG: dps:DP0797 dissimilatory sulfite reductase, alpha subunit (DsrA); PFAM: nitrite and sulphite reductase 4Fe-4S region.
  
     0.715
ADH85008.1
TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; KEGG: dps:DP0798 dissimilatory sulfite reductase, beta subunit (DsrB); PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
     0.711
ADH86165.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: dps:DP1106 heterodisulfide reductase, subunit A (HdrA).
  
     0.707
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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