STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH85401.1KEGG: dps:DP2965 hypothetical protein. (360 aa)    
Predicted Functional Partners:
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
     
  0.900
ADH85400.1
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.812
ADH85167.1
Acetyl-CoA carboxylase; KEGG: dps:DP1813 acetyl-coenzyme A carboxylase subunits alpha/beta; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region.
  
    0.586
ADH85397.1
AAA ATPase central domain protein; KEGG: dol:Dole_2133 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
  
    0.533
ADH85974.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.519
ADH86969.1
Sun protein; KEGG: dol:Dole_2231 sun protein; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
  
 0.517
ADH85399.1
PFAM: peptidase M48 Ste24p; TPR repeat-containing protein; KEGG: dps:DP2629 hypothetical protein.
       0.514
ADH85398.1
KEGG: rrs:RoseRS_3383 protein kinase; PFAM: WD40 repeat, subgroup; Serine/threonine-protein kinase-like domain; SMART: WD-40 repeat protein; serine/threonine protein kinase.
       0.513
pheT
KEGG: dps:DP1423 phenylalanyl-tRNA synthetase, beta chain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit.
  
  
 0.512
ADH85396.1
Hypothetical protein.
       0.489
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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