STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH85455.1Hypothetical protein; KEGG: son:SO_1427 decaheme cytochrome c. (479 aa)    
Predicted Functional Partners:
ADH85454.1
KEGG: afw:Anae109_1831 hypothetical protein.
       0.773
ADH85456.1
PFAM: doubled CXXCH domain protein; KEGG: gsu:GSU2503 cytochrome c family protein.
       0.727
ADH85457.1
PFAM: NHL repeat containing protein; KEGG: ade:Adeh_3066 NHL repeat-containing protein.
       0.684
ADH85453.1
PFAM: doubled CXXCH domain protein; KEGG: gur:Gura_0397 hypothetical protein.
       0.671
ADH85451.1
KEGG: dol:Dole_3267 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver.
       0.640
ADH85452.1
KEGG: dal:Dalk_0432 putative methyl-accepting chemotaxis sensory transducer; PFAM: histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein.
       0.640
ADH85458.1
KEGG: ank:AnaeK_3165 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
       0.637
ADH85459.1
KEGG: geo:Geob_3160 cytochrome c family protein; TIGRFAM: cytochrome C family protein; PFAM: doubled CXXCH domain protein.
       0.637
ADH85460.1
Hypothetical protein; KEGG: dvl:Dvul_1262 PpiC-type peptidyl-prolyl cis-trans isomerase.
       0.637
ADH85461.1
Hypothetical protein; KEGG: afw:Anae109_1834 putative lipoprotein.
       0.637
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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