STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH85479.1KEGG: aeh:Mlg_2163 Flp pilus assembly protein CpaB-like protein; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein. (292 aa)    
Predicted Functional Partners:
ADH85477.1
Response regulator receiver protein; KEGG: mfa:Mfla_1641 pilus assembly protein CpaE.
 
  
 0.992
ADH85478.1
PFAM: type II and III secretion system protein; KEGG: psp:PSPPH_4434 type II/III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.989
ADH85475.1
PFAM: Type II secretion system F domain; KEGG: pfl:PFL_0694 hypothetical protein.
 
  
 0.984
ADH85474.1
PFAM: Type II secretion system F domain; KEGG: pag:PLES_46801 TadC.
 
  
 0.977
ADH85480.1
PFAM: TadE family protein; KEGG: mfa:Mfla_1644 TadE-like protein.
 
  
 0.976
ADH85476.1
PFAM: type II secretion system protein E; KEGG: mfa:Mfla_1640 type II secretion system protein E.
 
  
 0.954
ADH85473.1
KEGG: bac:BamMC406_1448 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide repeat.
 
  
 0.934
ADH85481.1
PFAM: Flp/Fap pilin component; KEGG: ade:Adeh_2831 Flp/Fap pilin component.
  
  
 0.914
ADH84932.1
TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; KEGG: tme:Tmel_1711 putative PAS/PAC sensor protein; SMART: protein phosphatase 2C domain protein; PAS domain containing protein.
   
    0.842
ADH85471.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; EAL domain protein; KEGG: nmu:Nmul_A0328 diguanylate cyclase/phosphodiesterase; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; EAL domain protein.
  
    0.655
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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