STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH85482.1PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: tye:THEYE_A1221 foldase protein PrsA 1, putative. (305 aa)    
Predicted Functional Partners:
ADH85483.1
KEGG: tye:THEYE_A1221 foldase protein PrsA 1, putative.
 
    
0.592
ADH86006.1
PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: dps:DP3084 hypothetical protein.
 
   
 0.553
ADH86627.1
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: dps:DP0996 peptidyl-prolyl cis-trans isomerase D.
  
     0.546
ADH85544.1
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.535
ADH84777.1
Hypothetical protein; KEGG: gsu:GSU0016 peptidyl-prolyl cis-trans isomerase domain-containing protein.
  
     0.469
ADH85610.1
KEGG: dps:DP2886 pyruvate-flavodoxin oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding.
  
 
 0.456
ADH85484.1
PFAM: ResB family protein; KEGG: tye:THEYE_A1060 hypothetical protein.
       0.447
ADH85480.1
PFAM: TadE family protein; KEGG: mfa:Mfla_1644 TadE-like protein.
       0.404
ADH85481.1
PFAM: Flp/Fap pilin component; KEGG: ade:Adeh_2831 Flp/Fap pilin component.
       0.404
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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