STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH85537.1PFAM: type IV pilus assembly PilZ; KEGG: dba:Dbac_1448 type IV pilus assembly PilZ. (117 aa)    
Predicted Functional Partners:
ADH85536.1
KEGG: dba:Dbac_1449 hypothetical protein.
       0.697
ADH85538.1
PFAM: CheC domain protein; KEGG: ppd:Ppro_0086 CheC, inhibitor of MCP methylation.
       0.527
ADH85539.1
KEGG: ppd:Ppro_0087 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
       0.496
ADH85540.1
KEGG: ppd:Ppro_0085 diguanylate cyclase with PAS/PAC sensor; PFAM: PAS fold-4 domain protein; SMART: PAS domain containing protein.
       0.455
ADH85535.1
MJ0042 family finger-like protein; KEGG: dba:Dbac_1450 cobyrinic acid ac-diamide synthase; TIGRFAM: MJ0042 family finger-like protein; PFAM: Cobyrinic acid ac-diamide synthase.
       0.430
Your Current Organism:
Desulfurivibrio alkaliphilus
NCBI taxonomy Id: 589865
Other names: D. alkaliphilus AHT 2, Desulfurivibrio alkaliphilus AHT 2, Desulfurivibrio alkaliphilus str. AHT 2, Desulfurivibrio alkaliphilus strain AHT 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.